Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQHQSLFNKSQWTQLVKHFSAVAVLGLTIAAPAWAIDPTAKELRIGFQKS--SINFAIAKQ-QKLFEQEFPNAKITWNEFPAGPQILEALAVGSLDVGVTGDTPPVYAQAAGKPLYYIAYEAAKPLASAILVPKNSQLKQLKDI-KGKRIALQKG-SSSHYLLVQAVRKAGLKWSDITPIWLTPADARAAFQKGAVDAWAIWDPYYASAQLEDQARVLVSGKGL-S-PNYTFYLAAPNFVKQYPKAVPGLIKQINQADKWVQSYQVETASAIGQSTGLKPATSDLFIKRRPRPSSAAPLNSKVIAEQQQIADIFTQQGIIPKPISIKQAVWGAK
3UN6 Chain:A ((51-333))---------------------------------------QQVIKIGYLPITHSANLMMTKKLLSQYNHP--KYKLELVKFNNWPDLMDALNSGRIDGASTLIELAMKSKQKGSNIKAVALG--HHEGNVIMGQKGMHLNEFNNNGDDYHFGIPHRYSTHYLLLEELRKQLKIKPGHFSYHEMSPAEMPAALSEHRITGYSVAEPFGALGEKLGKGKTLKHGDDVIPDAYCCVLVLRGELLDQHKDVAQAFVQDYKKSG-FKMNDRKQSVDIMTHHFKQSRDVLTQSAAWT-SY-GD---LTIKPSGYQEITTLVKQHHLFN-PPAYDDFVEPS-


General information:
TITO was launched using:
RESULT:

Template: 3UN6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1611 38527 23.91 139.59
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : 23.91
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.470

(partial model without unconserved sides chains):
PDB file : Tito_3UN6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3UN6-query.scw
PDB file : Tito_Scwrl_3UN6.pdb: