Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNSVLTMAVNDSPITSVKTTQPLIALYCGSRAGNNPIYREKAIELASGIAEQGFGLVYGGASIGLMGQVAESVLAHGG--EAVGVIPEFMLDYEVAHAG---------------LTELHVVETMHERKAMMAER------ASAFIALPGGLGTFEEILEIATWGQLNQHQKPMILYNVNGFYNALIAQLDHAVQEGFLPLQHRAKLIVCEEIDQIYNVIKNLKMPKRFVV
5AJT Chain:A ((58-263))-------------------PRAKICVFCGSSGGASPAHMEAARQLGRVMAENNIDLVYGGGTVGLMGEVARTVCSINGPESVHGIIPEALVRYERDGTYQTVKDNKQVVPTETVYGRTTVVKDMHTRKKMMAEEVISGGPGSGFIGLSGGYGTMEEVFEVITWNQLGIHTKGICLLNVEGYWDGILQWINMAAAQGFVQPGNETIVVSAGDAEGAVRALREYKVS-----


General information:
TITO was launched using:
RESULT:

Template: 5AJT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 881 -42865 -48.65 -234.23
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -48.65
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.485

(partial model without unconserved sides chains):
PDB file : Tito_5AJT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5AJT-query.scw
PDB file : Tito_Scwrl_5AJT.pdb: