Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKDERIIQNQDNKKTIRHEDYIAGIGKGMAILDSFSSNQHRLKISMAAEKTGLTRAAARRHLLTLEYLGYLESD-G-HYYYLTPKVLKFSGAYLGAAQLPKVSQPLLNLLTNQTSLIYSVMVLDGYEAITIARSAAHQQTDRVNPYGLHLGNRLPAHATSAGKILLAHLSQEEQLDWLQKYPLQRLTKYTHVENDKFLELLKEIREQDWCYSREEHELGFHALAVPIYGQDFKVVAALNIVSPTMRTTEGYLIQYILPLLQETARDLRQVL
2XRN Chain:A ((15-251))-----------------------QVIARAASIMRALGSHPHGLSLAAIAQLVGLPRSTVQRIINALEEEFLVEALGPAGGFRLGPALGQLINQA--QTDILSLVKPYLRSLAEELDESVSLASLAGDKIYVLDRIVSE----RELRVVFPIGINVPAAATAAGKVLLAALPDETLQAALGE-QLPVLTSNT-LGRKALVKQLSEVRQSGVASDLDEHIDGVSSFATLLDTYLG--YYSLAIVMPSSRAS-K-QSDLIKKALLQSKLNIERAI


General information:
TITO was launched using:
RESULT:

Template: 2XRN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1111 -32685 -29.42 -139.08
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -29.42
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.408

(partial model without unconserved sides chains):
PDB file : Tito_2XRN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2XRN-query.scw
PDB file : Tito_Scwrl_2XRN.pdb: