Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTKLAILILSLAFFGSAHADVKTLEQNLKTNYPDLPVKGVYQSPVAGIYEVYTSGRIVYTNQDAKYFFVGNLVDIKQQ--KNMTEERIAELGKIDVKSLPLNQAI-KYVKGKGERTLYIFSDPDCPYCQRLEQNMVGV--DNVTVYVFLYPLTSLHPNAEKVSNQIWCSKNPSEAWTNYMLNRKLPAAGKSCTSPVQKNIALGQKLNIDGTPTLFLQDGQKISGVPGDAKQIEELLQSVK
1T3B Chain:A ((3-209))----------------------AAIKRKLQS--FNISNIVIKSSPISGIKTAVTDQGILYVSEDGKYLFEGKLYELTNNGPVDVAGKILV----DKLNSYK-DEMIVYPA-KNEKHVVTVFMDITCHYCHLLHQQLKEYNDLGITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNL-P-KEVKTPNIVKKHYELGIQFGVRGTPSIVTSTGELIGGYLK-PADLLRALEET-


General information:
TITO was launched using:
RESULT:

Template: 1T3B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 925 6372 6.89 31.54
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : 6.89
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.504

(partial model without unconserved sides chains):
PDB file : Tito_1T3B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1T3B-query.scw
PDB file : Tito_Scwrl_1T3B.pdb: