Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMRRLSTQDQNFKQVFAELLAFETVNDPNLVQTVDQIIADVRQHGDDHVLKLTQQFDRHPAHQFSDLELSQQQLKAAFDGLNQEIREALQLAADRIRTFHEAQKQDSWTYVDDLGNTLGQKVTPLDRVGIYVPGGLASYPSSVLMNAVPAHVAGVPEIIMVVPAPNGELNPLVLAAAYLAGVSRVFTIGGAQAVAALAYGTQTVPRVDKITGPGNRFVAAAKRAVFGQLGIDMIAGPSEILVYAEGVNNAEWLAMDVLSQAEHDTVAQAIFITPDGALLEAVESAIEKHLNELPKAEIARTSIENRGALVLVKDRAEAVDLINQVAPEHLE----LC------LDDAEAMSQDIRHAGAIFMGRYTPEAIGDYCAGPNHVLPTSGTARFSSPLGVYDFQKRSSLIMCSKDGV----KTLAKTADVLAVQENLDAHARSARYRYQ
4K7J Chain:A ((26-375))----------------GLLTDYGNASASPWMKKLQSVA-----QGSGETFRILQIGDSHTAG----------------DFFTDSLRKRLQKTWGDGGI--------GWVYP---ANVKGQRMAAVRHNGNWQSLTSRNNTGDFPLGGILAHTGSGGSMTLTASDGIASKQRVSLFAKPLLA-EQTLTVNG-NTVSANGGGWQVLDTGAALP----LTIHTEMPWDIGFINIENPAG--GITVSAMGINGAQLTQWSKWRADRMNDLAQT------GADLVILSYGTNEAFNN--NIDIADTEQKWLDTVRQIRDSLPAAGILIIGAPESLKNTLGVCGTRPVRLTEVQQMQRRVARQGQTMFWSWQ-NAMGGICS-------------------MKNWLNQGW---AAKDGVHFSAKGYRRAAEMLA--DSLEELVRSA-----


General information:
TITO was launched using:
RESULT:

Template: 4K7J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2029 -115958 -57.15 -345.11
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -57.15
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.225

(partial model without unconserved sides chains):
PDB file : Tito_4K7J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4K7J-query.scw
PDB file : Tito_Scwrl_4K7J.pdb: