Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYQINALNPKDEGHKARKRFGQNFLHDQRVIAKIVRSVNPRTGDNIVEIGPGLAALTSPLIGEC-DALTVVELDRDLAAGLPERVPHPERLTIVEADALKYDFSQLVKDGRPLRVVGNLPYNISTPLLFHLLEFGSQVKDMHFMLQKEVVERITAEPNTKEYGRLSVMIQYYCQPTFLFEVPAGAFNPPPKVTSAVFRLVPYEQKPITAKDEKALARLVAHVFTQRRKTLRNSLKG--MLAEDGFEKAGVDPMARPETLTLAEFVALADQMVA
4JXJ Chain:A ((31-275))----------------------NFIFDGSLCDKIVRASGLEENSNVLEIGPGTGGLTRSILHKNPKLLTVIETDERCIPLLNEIKQYHPNLNIIKQDALKLKLSDL--NTNKITIISNLPYHIGTELVIRWLKESSLVASMTLMLQKEVVERICAKPSTKAYGRLSVICSLIATVEKCFDVAPTAFYPPPKVYSAIVKLTPLENIP-NSDLISKVELITKMAFAGRRKMIKSSLKNLAPNISELLAKLNISDNCRAENLTPNDYLSLASL---


General information:
TITO was launched using:
RESULT:

Template: 4JXJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1243 -43434 -34.94 -179.48
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -34.94
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.515

(partial model without unconserved sides chains):
PDB file : Tito_4JXJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4JXJ-query.scw
PDB file : Tito_Scwrl_4JXJ.pdb: