Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKQNFAIVGLGRFGGSICRTLIEAGQEVLAIDSNEDRVNEYMNIATHAVVANAQDEMTLRSLGIRNFDHVIVAIGEDIQASILVTLMVKEMGVPNILAKAQNEYHARVLEKIGADRVVHPERDMGIRIAHNLVSKNILDYLELSDKYSLAEIRVSNPKFFNKTLAELNFRQRFDLTVVAIRRVDQTVIASPAADEYVRENDNLLVIGETGDVDILDDKMNQ
2HMT Chain:B ((7-141))--KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQNYYHHKVLEKIGADRIIHPEKDMGVKIAQSLSDENV------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2HMT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 627 -115235 -183.79 -853.59
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain B : 0.75

3D Compatibility (PKB) : -183.79
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.626

(partial model without unconserved sides chains):
PDB file : Tito_2HMT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2HMT-query.scw
PDB file : Tito_Scwrl_2HMT.pdb: