Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMATPVTDPPKIIGRELHLDRLIGSGGFGEVYLAVRTKLATNPKHNFTFPAECVVKVMRRGLCTEEDVAAMNREVATLSSM-DHPYIVAYIGAWVEAARGKFFGCYCLAMKYCEGGDLHGFIAQCIKA-HRLPPVDVAVRIMAQVFSALNYSHSRRLIHRDIKPGNVFLTLQKSGVPDKAMVGDYGLVRSLEATRQ--LVKTRVGTPTYISPEIAAGEAYSTKTDIFSAGTMFYELLS-LHRPFWKRMMTDQQLFREVLHRDPMPQFRAYTSSVYGTALADVIEACLTKHEANRATAYDALVRLTSPITAYVLKYAIPVYPEKDALTTSPPRPPAASSAPDGHASAADADGDAATARQRLERLFLVRKGTAVGARLTRLLSHNAELLFQVRVLVACRSDNTDHLENGLAELLWAFPDAEVPFQEVIDLVMSDYRQLAE
2PSQ Chain:B ((78-363))----------FPRDKLTLGKPLGEGCFGQVVMAEAVGID------PKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD------GPLYVIVEYASKGNLREYLRARRPPGEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN-----NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI--PVEELFKLLKEGH-RMD----KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL----------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2PSQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1328 -75460 -56.82 -282.62
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain B : 0.65

3D Compatibility (PKB) : -56.82
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.427

(partial model without unconserved sides chains):
PDB file : Tito_2PSQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PSQ-query.scw
PDB file : Tito_Scwrl_2PSQ.pdb: