Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequence-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TQKCIITIRKADPALGQDTLYDLVSLAPNSDLTFGKIPASMTEVTFGVDEKCQA-RLVRGDLSRPYEYKGMQNPLYGLDGPD---FVKK---LQAWRRKPENSINFSLW------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2Y3U Chain:A ((15-695))NLYFQGGTMYDFEYLNGLSYTELTNLIKNIKWNQINGLFNYSTGSQKFFGDKNRVQAIINALQESGRTYTANDMKGIETFTEVLRAGFYLGYYNDGLSYLNDRNFQDKCIPAMIAIQKNPNFKLGTAVQDEVITSLGKLIGNASANAEVVNNCVPVLKQFRENLNQYAPDYVKGTAVNELIKGIEFDFSGAAYEKDVKTMPWYGKIDPFINELKALGLYGNITSATEWASDVGIYYLSKFGLYSTNRNDIVQSLEKAVDMYKYGKIAFVAMERITWDYDGIGSNGKKVDHDKFLDDAEKHYLPKTYTFDNGTFIIRAGDK-VSEEKIKRLYWASREVKSQFHRVVGNDKALEVGNADDVLTMKIF----NSPEEYK-FNTNINGVSTDNGGLYIEPRGTFYTYERTPQQSI-FSLEELFRHEYTHYLQARYLVDGLWGQGPFYEKNRLTWFDEGTAEFFAGSTRTSGVLPRKLILGYLAKDKVDHRYSLKKTLNSDDSDWMFYNYGFAVAHYLYEKDMPTFIKMNKAILNTDVKSYDEIIKKLSDDANKNTEYQNHIQELVDKYQGAGIPLVSDDYLKDHGYKKASEVYSEISKAASLTNTSVTAEKSQYFNTFTLRGTYTGETSKGEFKDWDEMSKKLDGTLESLAKNSWSGYKTLTAYFTNYRVTSDNKVQYDVVFHGVLTDNG


General information:
TITO was launched using:
RESULT:

Template: 2Y3U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 335 37783 112.78 397.71
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.54

3D Compatibility (PKB) : 112.78
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.54
QMean score : 0.147

(partial model without unconserved sides chains):
PDB file : Tito_2Y3U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2Y3U-query.scw
PDB file : Tito_Scwrl_2Y3U.pdb: