Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-STSTKVKLENRKEPA-------LCHVVIIKPAQIRHPLDTWVETFAWVKAGKVVEWHSPKYGSVKVKTDE---DD------CHLTFLVNELING--YTCQLSR-----------
1FNG Chain:B ((119-214))RRVEPTVTVYPTKTQPLEHHNLLVCSVSDFYPGNIE------VR---WFRNGKEE-----KTGIVS--TGLVRNGDWTFQTLVMLETVPQS---GEVYTCQVEHPSLTDPVTVEW


General information:
TITO was launched using:
RESULT:

Template: 1FNG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 182 11836 65.03 179.33
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain B : 0.62

3D Compatibility (PKB) : 65.03
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.631

(partial model without unconserved sides chains):
PDB file : Tito_1FNG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1FNG-query.scw
PDB file : Tito_Scwrl_1FNG.pdb: