Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPLRKMKIPFLLLFFLWEAESHAASRPNIILVMADDLGIGDPGCYGNKTIRTPNIDRLASGGVKLTQHLAASPLCTPSRAAFMTGRYPVRSGMASWSRTGVFLFTASSGGLPTDEITFAKLLKDQGYSTALIGKWHLGMSCHSKTDFCHHPLHHGFNYFYGISLTNLRDCKPGEGSVFTTGFKRLVFLPLQIVGVTLLTLAALNCLGLLHVPLGVFFSLLFLAALILTLFLGFLHYFRPLNCFMMRNYEIIQQPMSYDNLTQRLTVEAAQFIQR-NTETPFLLVLSYLHVHTALFSSKDFAG--------------------------------------------------------------------------------------------------KSQHGVYGDAVEEMDWSVGQILNLLDELRLANDTLIYFTSDQGAHVEEVSSKGEIHGGSNGIYKGGKANNWEGGIRVPGILRWPRVIQAGQKIDEPTSNMDIFPTVAKLAGAPLPEDRIIDGRDLMPLLEGKSQR--SDHEFLFHYCN--------AYLNAVRWHPQNSTSIWKAFFFTPNFNPVGSNGCFATHVCFCFGSYVTHHDPPLLFDISKDPRERNPLTPAS--EPRFYEILKVMQEAADRHTQTLPEVPDQFSWNNFLWKPWLQLCCPSTGLSCQCDREKQDKRLSR
5G2V Chain:A ((27-511))------------------------KRPNIIFMMTDDHTTQAMSCYGGNLIQTPNMDRIANEGIRFDNCYAVNALSGPSRACILTGKFSHENGFTDNAS-----------TFNGDQQTFPKLLQQAGYQTAMIGKWHLISE------------PQGFDHWSILSGQHEQ------G-DYY---DP-------------------------------------------DFWED--------------GKH----IVEKGYATDIITDKAINFLENRDKNKPFCMMYHQKAPHRNWMPAPRHLGIFNNTIFPEPANLFDDYEGRGKAAREQDMSIEHTLTNDWDLKLLTREEMLKDTTNRLYSVYKRMPSEVQDKWDSAYAQRIAEYRKGDLKGKALISWKYQQYMRDYLATVLAVDENIGRLLNYLEKIGELDNTIIVYTSDQGFFLGEHGW-------------FDKRFMYEECQRMPLIIRYPKAIKAGSTSSAISMNVDFAPTFLDFAGVEVPS--DIQGASLKPVLENEGKTPADWRKAAYYHYYEYPAEHSVKRHYGI------RTQDFKLIHFY------------------------NDIDEWEMYDMKADPREMNNIFGKAEYAKKQKELMQLLEETQKQY----------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5G2V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2136 -34076 -15.95 -91.11
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -15.95
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.494

(partial model without unconserved sides chains):
PDB file : Tito_5G2V.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5G2V-query.scw
PDB file : Tito_Scwrl_5G2V.pdb: