Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTSSGPGPRFLLLLPLLLPPAASASDRPRGRDPVNPEKLLVITVATAETEGYLRFLRSAEFFNYTVRTLGLGEEWRGGDVARTVGGGQKVRWLKKEMEKYADREDMIIMFVDSYDVILAGSPTELLKKFVQSGSRLLFSAESFCWPEWGLAEQYPEVGTGKRFLNSGGFIGFATTIHQIVRQWKYKDDDDDQLFYTRLYLDPGLREKLSLNLDHKSRIFQNLNGALDEVVLKFDRNRVRIRNVAYDTLPIVVHGNGPTKLQLNYLGNYVPNGWTPEGGCGFCNQDRRTLPGGQPPPRVFLAVFVEQPTPFLPRFLQRLLLLDYPPDRVTLFLHNNEVFHEPHIADSWPQLQDHFSAVKLVGPEEALS---PGEARDMAMDLCRQDPECEFYFSLDADAVLTN--LQTLRILIEENRK--VIAPMLSRHGKLWSNFWGALSPDEYYARSEDYVELVQRKRVGVWNVPYISQAYVIRGDTLRMELPQRDVFSGSDTDPDMAFCKSFRDKGIFLHLSNQHEFGRLLATSRYDTEHLHPDLWQIFDNPVDWKEQYIHENYSRALEGEGIVEQPCPDVYWFPLLSEQMCDELVAEM--EHYGQWSGGRHEDSRLAGGYENVPTVDIHMK-QVGYEDQWLQLLRTYVGPMTESLFPGYHTKARAVMNFVVRYRPDEQPSLRPHHDSSTF-TLNVALNHKGLDYEGGGCRFLRYDCVISSPRKGWALLHPGRLTHYHEGLPTTWGTRYIMVSFVDP
5TZJ Chain:A ((1-349))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKFSVIVPTYNSEKYITELLNSLAKQDFPKTEFEVVVVDD-----CSTDQTLQIVEKYRNKLNLKVSQLETNSGGPGKPRNVALKQA----EGEFVLFVDSDDYINKETLKDAAAFIDEHHSDVLLIKMKGVNGRG--------VPQSMFKETAPEVTLLNSRIIYTLSPTKIYRTALLKDNDIYFPEELKS------AEDQLFTMKAYLNANRISVLSDKAY---YYATKR--------------------EGEHMSSAYVSPEDFYEVMRLIAVEIL-NADLEEAHKDQILAEFLNRHFSFSR-----------------TNGFSLKVKLEEQPQWINALGDFIQAVPERVDALVMSKLRPLLHYARAKDIDNYRTVEESYRQGQYYRFDIVDGKLNIQFNEGEPYFEGID-----------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5TZJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1820 13161 7.23 38.94
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : 7.23
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.182

(partial model without unconserved sides chains):
PDB file : Tito_5TZJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5TZJ-query.scw
PDB file : Tito_Scwrl_5TZJ.pdb: