Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSQEFINPSDGVIRQYLATSKTLAVVGLSDREETTSNRVTKEMQARGY--KIIPVNPKAAGGEILGEKAYASLAEIPFPVDIVNVYRRSEFLPDVARDFLKADAKIFW-AQLGL-------ESLEAKEILRDGGCDDIVMNRCIKREHTRLIEEA
4Y8V Chain:A ((2-137))----------NDLERLF-NPSAIAVVGASKDPSKIGSQILRNLLSYGFKGKVYPINPTAD--ELMGLKCYPKVSDVPDKVDVAVISVPSDKVLGVIDDCGKAGVKFAVVITSGFKEVGNEELEEELVRRAHSYG-MRVLGPNIFGYLYAP-----


General information:
TITO was launched using:
RESULT:

Template: 4Y8V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 612 -23653 -38.65 -187.72
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -38.65
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.604

(partial model without unconserved sides chains):
PDB file : Tito_4Y8V.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4Y8V-query.scw
PDB file : Tito_Scwrl_4Y8V.pdb: