Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIQKHAIPILEFDDNPQAVIMPNHEGLDLQLPKKCVYAFLGEEIDRYAREVGANCVGEFVSATKTYPVYVINYKGEEVCLAQAPVGSAPAAQFMDWLI-GYGVEQIISTGTCGVLAD-IEENAFLVPVRALRDEGASYHYVA-PCRYMEMQPEAIAAIEEVLEDRGIPYEEVMTWTTDGFYRETAEKVAYRKEEGCAVVEMECSALAAVAQLRGVLWGELLFTADSLADLDQYDSRDWGSEAFNKALELSLASVHHL
4M7W Chain:A ((26-258))---------------------PHIGANRGDVAETILLPGDPLRAKYIAETFLEDVV-Q-YNNVRGMLGFTGTYKGKKVSVQGTGMGVPSIGIYSHELITEFGVKNLIRVGTAGSYQEDVKVRDVVIAMSASTDSAINKLRFNGADYAPTASSDLVFKAYEIAKAKGLNVKAGNVFTSDTFYGDDPNAWKKWAEFGVLCVEMETAQLYTTAAKLGVNALTLLTISDSFITH-EVTSAEERQTTFNEMIEVALETALQL


General information:
TITO was launched using:
RESULT:

Template: 4M7W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1331 -50733 -38.12 -220.58
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -38.12
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.521

(partial model without unconserved sides chains):
PDB file : Tito_4M7W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4M7W-query.scw
PDB file : Tito_Scwrl_4M7W.pdb: