Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNGIINLKKEAGMTSHDAVFKLRKILGTKKIGHGGTLDPDVVGVLPIAVGKATRMVEFMQDEGKIYEGEIILGYSTTTEDASGEVVAETPVLSSLDEKLVDEAIASLTGPITQIPPMYSAVKVNGRKLYEYARAGQEVERPERQVIIYQFERTSPISYDGQ--LARFTFRVKCSKGTYIRTLSVDLGEKLGYAAHMSHLTRTSAAGLQLEDALALEEIAEKVEAGQLDFLHPLEI-GTGDLVKVFLTPEEATEVRFGRFIELDQTDKEL-AAFEDDKLLAILEKRGNLYKPRKVFS
1SGV Chain:B ((5-283))GPGIVVIDKPAGMTSHDVVGRCRRIFATRRVGHAGTLDPMATGVLVIGIERATKILGLLTAAPKSYAATIRLGQTTSTEDAEGQVLQSVP-AKHLTIEAIDAAMERLR----------------------------SVQLEARPIRIDRFELLAA---RRRDQLIDIDVEIDCSSGTYIRALARDLGDALGVGGHVTALRRTRVGRFELDQARSLDDLAERP-----ALSLSLDEACLLMFARRDLTAAEASAAANGRSLPAVGIDGVYAACDADGRVIALLRDEGSR--------


General information:
TITO was launched using:
RESULT:

Template: 1SGV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1296 -44207 -34.11 -178.97
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain B : 0.74

3D Compatibility (PKB) : -34.11
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.519

(partial model without unconserved sides chains):
PDB file : Tito_1SGV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1SGV-query.scw
PDB file : Tito_Scwrl_1SGV.pdb: