Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEQFLDNIKDLEVTTVVRAQEALDKKETATFFIGRKTCPYCRKFAGTLSGVVAETK--AHIYFINSEEPSQLNDLQAFRSRYGIPTVPGFVHITDGQINVRCDSSMSAQEIKDFAGL
2YZU Chain:A ((4-103))----------PIEVTDQNFDETLGQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDE------NPKTAMRYRVMSIPTVILFKDGQPVEVLVGAQPKRNYQAKIE-


General information:
TITO was launched using:
RESULT:

Template: 2YZU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 412 -33907 -82.30 -345.98
target 2D structure prediction score : 0.80
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -82.30
2D Compatibility (Sec. Struct. Predict.) : 0.80
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.761

(partial model without unconserved sides chains):
PDB file : Tito_2YZU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YZU-query.scw
PDB file : Tito_Scwrl_2YZU.pdb: