Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKLVFVCLGNICRSPMAEFVMKSMTDNYEIQSRATSSWEHGNPIHKGTQGIFQQYEI----PYDKNKTSLQISKEDFEAFDYIIGMDASNISDLRQMCPVDCQDKIY-------SFSSESVPDPWYTGD--FEETYRRVQEGCQAWLERLEKES
3IDO Chain:B ((23-173))--KLLFVCLGNICRSPAAEAVMKKVIQNHHLTEKYICDSAGTCSYHEGQQADSRMRKVGKSRGYQVDSISRPVVSSDFKNFDYIFAMDNDNYYELLDRCPEQYKQKIFKMVDFCTTIKTTEVPDPYYGGEKGFHRVIDILEDACENLIIKLEE--


General information:
TITO was launched using:
RESULT:

Template: 3IDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 712 17947 25.21 130.05
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain B : 0.78

3D Compatibility (PKB) : 25.21
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.434

(partial model without unconserved sides chains):
PDB file : Tito_3IDO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3IDO-query.scw
PDB file : Tito_Scwrl_3IDO.pdb: