Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence ---MSKLLDKILSRENMLEAYNQVKSNKGS------AGIDGMTIEEMDNYLRQNWRLTKELIKQRKYKPQPVLRVE----IPKPDGGIRQLGIPTVMDRMIQQAIV--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 4IMP Chain:A ((31-550)) SDPAAGWFWQAVARQDLKSVSDALDLDADAPLSATLPALSVWHRQERERVLADGWRYRVDWVRV---APQPVRRTRETWLLVVPPGGIEEALVERLTDALNTRGISTLRLDVPPAATSGELATELRAAADGDPVKAILSLTALDERPHPECKDVPSGIALLLNLVKALGEADLRIPLWTITRGAVKAGPADRLLRPMQAQAWGLGRVAALEHPERWGGLIDLPDSLDGDVLTRLGEALTNGLAEDQLAIRQSGVLARRLVPAPANQPAGRKWRPRGSALITGGLGAVGAQVARWLAEIGAERIVLTSRRGNQAAGAAELEAELRALGAQVSIVACDVTDRAEMSALLAEFDVTAVFHAAGVGRLLPLAETDQNGLAEICAAKVRGAQVLDELCDSTDLDAFVLFSSGAGVWGGGGQGAYGAANAFLDTLAEQRRARGLPATSISWGSWAGGGMADGAAGEHLRRRGIRPMPAASAILALQEVLDQDETCVSIADVDWDRFVPTFAATRATRLFDEVPAARKAM

General information: TITO was launched using: RESULT: Template: 4IMP.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 121 3916 32.36 43.51 target 2D structure prediction score : 0.62 Monomeric hydrophicity matching model chain A : 0.54 3D Compatibility (PKB) : 32.36 2D Compatibility (Sec. Struct. Predict.) : 0.62 1D Compatibility (Hydrophobicity) : 0.54 QMean score : 0.372

(partial model without unconserved sides chains): PDB file : Tito_4IMP.pdb: (Unconserved sides chains are recalculated) : Sequence: align-4IMP-query.scw PDB file : Tito_Scwrl_4IMP.pdb: