Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLYIWMPETNGVWHWSNGENWLQAASLDQLIQDLQIHQGKEAAVFFPSRHAQMLQQTMAKFHYKQLGADGVKYLLEEFVTLPIDHMKVVHHFHADQLTVLAVAQGM--------VETWQHSLALLPTKLVALLPDFLVLPEPQAQQVILCNIGHQLLVRENK--------WLGNSID----------DLGLFL-EFQSAETHYQYSGLTAEQLESLEA------ASSAEQRSEFVYQFQPLDKTKQHPFNVLPKSK------GQERTFSNYWKACAAVVLA------IIVVQFSYDLLRWVKLKKVADQTAEQAIEQYKYWFGSSSGRVTEQNVRSNFKSRLEVS------------QQGDTQALSLLSRVGPILMQRQILAQQLN-YDASILTMALKTKSADDLQALTQQLNQQGFKAELGNVQADGSGAIGVVKIQ-------------------
3HJH Chain:A ((5-450))YRYTLPVKAGEQRLLGELTGAACATLVAEIAER---HAGPVVLIAPDMQNALRLHDEISQFTDQMVMN------LADWETLPYDSFSPHQDIISSRLSTLYQLPTMQRGVLIVPVNTLMQRVC--PHSFLHGHALVMKKGQRLSRDALRTQLDSAGYRHVDQVMEHGEYATRGALLDLFPMGSELPYRLDFFDDEIDSLRVFDVDSQRTLEEVEAINLLPAHEFPTDKAAIELFRSQWRDTFEVKRDPEHIYQQVSKGTLPAGIEYWQPLFFSEPLPPLFSYFPANTLLVNTGDLETSAERFQADTLARFENRGVDPMRPLLPPQSLWLRVDELFSELKNWPRVQLKTEHLPTKAANANLGFQKLPDLAVQAQQKAPLDALRKFLETFDGPVVFSVESEGRREALGELLARIKIAPQRIMRLDEASDRGRYLMIGAAEHGFVDTVRNLALICESDLL


General information:
TITO was launched using:
RESULT:

Template: 3HJH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1824 12302 6.74 33.34
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : 6.74
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.136

(partial model without unconserved sides chains):
PDB file : Tito_3HJH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3HJH-query.scw
PDB file : Tito_Scwrl_3HJH.pdb: