Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLDYLQALKRIPEARGAWILHGQEPLLEQNLLDTFRKSWQQQD---------------------IERQRYDIS------SVSDWKNVFNALNSLSLFSQQLAIEVHGNIKPDANGLKQLKSYIQHN-ETNLLLIVLPKQDSSSLKSAFFQVVEANGVVVALTANYPQDRQRILAAEAEKLEIQLDNDAWQWLMQHHEHNLLAAKNSLMRVRDTFPDQKLIQIEQLYACLQDQ-SRYTTYDLSDALLEGNLAQSIKIFQYLIGSGEPESLILWTLSKEMRLLMQLFEQPHNALQLGIWKTKVSLYQQALRRLNPQQFLGWSALLLQIDAAIKG-MSNENAQHLMQQAIAELCGKTLFIH
1A5T Chain:A ((21-324))------------GRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREP------ERLLATLRSRCRLHYLAPPPEQYAVTWLSRE-----VTMSQDALLAALRLSAGSPGAALALFQGDN-------WQARETLCQALAYSVPSGDWYSLLAALNHEQ-----------------APARLHWLATLLMDALKR----------VTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVT-GINRELLITDLLLRIEHYLQ---


General information:
TITO was launched using:
RESULT:

Template: 1A5T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1187 -11389 -9.59 -42.49
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -9.59
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.471

(partial model without unconserved sides chains):
PDB file : Tito_1A5T.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1A5T-query.scw
PDB file : Tito_Scwrl_1A5T.pdb: