Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLQTIACAVAIATGGLFFSHTMNEARAATNTAAVSQSIQPTQEQALVARQLATLVDRQHYLNMRLDANTSNRILDMYLDSLDPDHSLFLDAEVQNYKKLYGSNFGASLKAGNLTGPFAIHQQYRERLKQFYEFMLAELKKPQNLKQPNTFIEVDREKAPYFKTSAEQQNHWRKMLVSQLINLTISREEEQAKQKALKENPSLADGQDLTGPEDLTPAQTLTKRYTRQLERISRVKSDDVLDKTLNAMLATYDPHSNYYPPIDAIELNRQTTLQLEGIGVSIRPERGN-EDYTKIETIVEGGPASKSGQVKSGDRIVGVAQEG-GKMIDVVGWS------------SSEIV--GLIR--GKRGTKVTLKLLGAGASMSQARNVTLVRDVIQEE--------D-AGV--R-------------------------------SRTVEVTR------DGKKHLLGVIEIPSFYFDYRSRRAGQQYR----SVSEDTANAFEALKAKKVEGIIIDLRNDPGGSLEEVARMLGQVIKSGPVVQ---I--RDGN------------------------------------------------------GNV----------SVFEDNDGGQQIYTGPLAVLVNLASASASEIYSAAIQDYERGIIIGSTTTGKGTAQVQLDTLAYGQA---TLTQRKFYRVTGGSTQNKGVVPDIKLVDIYNE-E-FG-ERKSKNALKWDTIPTAPFKREGSVQPYVAKLSQLSEQRVAVDPQFKYLNKRTAIAKVTSDQKQVVLDIDKRRAELLSLEKQTLDAENERRIATGQKPFPNWESYQASLDALAESRAKMKANQRPALPEEETFVNEAANVLMDYAKLQNR
3DPN Chain:A ((85-597))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PSTSFCQQVLADFIGGLNDFHAGVTFFAIE----------SAYLPYTVQK---SSDGRFYFVDIMTF----SS-EIRVGDELLEVDGAPVQDVLATLYGSNHKGTAAEESAALRTLFSRMASLGHKVPSGRTTLKIRRPFG-TTR--EVRVKWRYVPEGSLFYSPMVPHFWAELRNHYATSGLKSGYNIGSTDGFLPVIGPVIWESEGLFRAYISSVTDGDGKSHKVGFLRIPTYSWQDME-----DFDPSGPPPWEEFAKIIQVF-SSNTEALIIDQTNNPGGSVLYLYALLSMLTDRPLELPKHRMILTQDEVVDALDWLTLLENVDTNVESRLALGDNMEGYTVDLQVAEYLKSFGRQVLNCWSKGDIELSTPIPLFGFEKIHPH-PRVQYSKPICVLINEQDFACADFFPVVLKDNDRALIVGTRTAGAGGFVFNVQFPNRTGIKTCSLTGSLAVREHGAFIENIGVEPHIDLPFTANDIRYKGYSEYLDKVKKLVCQLINN------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3DPN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1372 32273 23.52 96.91
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : 23.52
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.262

(partial model without unconserved sides chains):
PDB file : Tito_3DPN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DPN-query.scw
PDB file : Tito_Scwrl_3DPN.pdb: