Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMATPFWYNTALHLLKPFYRWRIKRRAESLELYQQECLERFGPFEAPKNVKAIWFHAVSVGETNAAQPLIEYYLKLGQPVLVTNTTKTGQARAKSLFLKEPYLDLFQAVYLPVDQKPLLKKFFE-LYQPKLLALVETELWPNLIDQAKLQHVPCLLLNARLSEKSAKGYGKVSGLTAGMLKQLDWVLAQDSATRQRYVELGLDEHKSQVVGNIKFDIHAPEAFIKQAAQLRQQWYLE-NRQVVTIASTHAP-EEQQILEAFAPYLNSDRELVCIVVPRHP----ERFDEVFEICQNLNLITHRRSMGQSIHASTQVYLADSMGELWLWYALSQVCFVGGSLNEPGGGHNILEPMVLNVPTVVGPRYFNFQTIVDEFIDENAVLIAQDAQQVVDIWLACLAEPEATEQLVAQAHKVLQRNQG---SLQKHIGVINRYLAEKS
4XSU Chain:A ((89-384))-----------------------------------------------------------------------------------------------------------------------KVVQTAHEYDLIYANTQKALVVGAIASFIARRPLVYHLHDILSPEHFSQTNLRVAVNLANRFASLVIANSQASQTAFIQAGGRAELTKVIYNGFDINLYKTSPS-DISKLRQQLGVANNFVVGHFSRLSPWKGQHILIDALAQCP---PQVTAILVGDALFGEQDYVKELHQQITRLGLE-------------NRVKFLGFRADIPQLMAACDLVAHTSTAPE-PFGRVIVEAMLCGKPVV-AAKAGGAMELVEH-GVNGFLTTPGESQELANIINTCIEDTQKTATIASNAQAIASQRFDVVTINQQIAETLSSL-----


General information:
TITO was launched using:
RESULT:

Template: 4XSU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1528 -35605 -23.30 -124.49
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -23.30
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.336

(partial model without unconserved sides chains):
PDB file : Tito_4XSU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4XSU-query.scw
PDB file : Tito_Scwrl_4XSU.pdb: