Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTHTALDQLKTLTTVVADSSDLEAIRKFRPLDATTNPSLITAAAEQPESKELIEDAYYQAKEEG--YKNDELI-ERTIDILTVKFGVEILKLIEGRVSTEVDTALSYDTEATIQKAHELCELYKGYGIDQSRILIKIASTWEGIQAAKVLEAEGIACNLTLLFGLHQAQACADAKVTLISPFVGRILDWYKKAEGVDSYP-IEKDPGVVSVKKIYTYYKQQNIPTQVMGASFRSIDQVLGLAGCDLLTISPSLLTQLEQDTRTVDAALDANKAKQAEAIVR-PAQDEQSFKDELNHDLMAFQLLQGGVDGFIKARDQLSLLLRQSFGIDAEIKS
3TKF Chain:B ((25-345))MQKSVLEQLKQVTMVVADTGDFELIKKYKPVDATTNPSLILKAVKEQKYSNLVAETISKVKANNPDLNSDDLVKEIAIEIL-VSFGIKILDVIEGKVSSEVDARVSFNSATTIDYAKRIIARYESNGIPKDRVLIMIAATWEGIKAAKLLQKEGINCNLTLIFDKAQAKACAEAGVYLVSPFVGRITDWQMQQNNLKTFPAIADDDGVNSVKAIYKLYKSHGFKTIVMGASFRNVEQVIALAGCDALTISPVLLEEL----KNRDEHLEVKLT--------SPQISEADFRWLMNENAMATHKLAEGIRLFTKDTIELENIIKQNL--------


General information:
TITO was launched using:
RESULT:

Template: 3TKF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1725 -19322 -11.20 -62.73
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain B : 0.83

3D Compatibility (PKB) : -11.20
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.558

(partial model without unconserved sides chains):
PDB file : Tito_3TKF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TKF-query.scw
PDB file : Tito_Scwrl_3TKF.pdb: