Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSQLSTIIEQAFEDCANFTAADCPSEIRQAVEEAIAGLDNGTLRVAEKINGEWVVHQWLKKAVLLSFKLNDNKPIESCDLRFYDKVETKFSGWTEEQFKAAGVRVVPPAVARRGSFQAKNVVLMPSYVNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPTIIEDNCFIGARSEIVEGVIVEEGSVISMGVYIGQSTRIYDRETGEIHYGRVPAGSVVVPGNLPSADGKYSLYAAIIVKKVDAQTRAKTSLNDLLRAD
4E1K Chain:A ((355-427))-------------------------------------------------------------------------------------------------------------------------------------VGKGSKVNHLTYVGD-SEIGSNCNIGAGV-ITCNYDGANKFKTIIGDDVFVGSDTQLVAPVKVANGATIGAGTTI-----------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4E1K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 354 -56220 -158.81 -770.13
target 2D structure prediction score : 0.34
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -158.81
2D Compatibility (Sec. Struct. Predict.) : 0.34
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.533

(partial model without unconserved sides chains):
PDB file : Tito_4E1K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4E1K-query.scw
PDB file : Tito_Scwrl_4E1K.pdb: