Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMATTNQLIRKGRTTLVEKSKVPALKACPQRRGVCTRVYTTTPKKPNSAMRKVCRVRLTSGFEVSSYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGSLDCAGVKDRNQSRSKYGAKRPKK
2VQE Chain:L ((5-121))-PTINQLVRKGREKVRKKSKVPALKGAPFRRGVCTVVRTVTPKKPNSALRKVAKVRLTSGYEVTAYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGVYDAAGVKDRKKSRSKYG------


General information:
TITO was launched using:
RESULT:

Template: 2VQE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain L - contact count / total energy / energy per contact / energy per residue : 469 -29115 -62.08 -248.85
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain L : 0.93

3D Compatibility (PKB) : -62.08
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.93
QMean score : 0.548

(partial model without unconserved sides chains):
PDB file : Tito_2VQE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2VQE-query.scw
PDB file : Tito_Scwrl_2VQE.pdb: