Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFISFEGTEGVGKTTLIRKIHQHFEEQGKQVVLTREPGGTPLAEQIRSMLLAVNHDENMSHDTELLLIYAARAQHLQQVILPALESNKIVLSDRFTDASFAYQCSGRGLSQDKLQLLNQNFVSRM-PEVTFWLDAPIELGMNR-ARERGALDRFEQEKLSFFTKVREGYETLWKAEPERIKRLDATQSPDQVFEQALQYLA
4DWJ Chain:D ((28-220))-FITFEGPEGSGKTTVINEVY-HRLVKDYDVIMTREPGGVPTGEEIRKIVLEGN---DMDIRTEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAINGLYPDLTIYLNVSAEVGRERIIKNSRDQNRLDQEDLKFHEKVIEGYQEIIH---QRFKSVNADQPLENVVEDTYQ---


General information:
TITO was launched using:
RESULT:

Template: 4DWJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 878 -12211 -13.91 -64.95
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain D : 0.82

3D Compatibility (PKB) : -13.91
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.550

(partial model without unconserved sides chains):
PDB file : Tito_4DWJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4DWJ-query.scw
PDB file : Tito_Scwrl_4DWJ.pdb: