Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSKDTIIALHAEHQGRWKNREEIAERMIALIGQLYREKNIVVSVYGRSLINRSVIQILKTHRRTRVVDVELSVVNTFPILEALAKVENIGSAEVDIGKLAVEYKEKGGDVDAFVAQAVESIKGSATSEQPKDVVLYGFGRIGRILARLIISQSGLGRGLSLKAIVVRKSSDGDLAKRAS-LLRRDSIHGTFAGTISVDEENEAIIANGNFIKVIYASSPSEVDYTQYGIENALLIDNTGKWRDAEGLSQHLKCPGVARVVLTAPSKGEMKNVVFGVNNSDILDEDKIISAASCTTNAITPILKVLDDKYKVLNGHVETVHSFTNDQNLIDNYHKADRRGRAATLNMVITETGAAKAVAKALPALKGKLTGNSVRVPTPNVSLAILNLTLDKEVDREEVNEYIRQISINSNLQGQIGYTNSTEVVSSDFIGSRTAGVYDAQATITSGNRLTAYV-WYDNEVGYSCQVLRIAEQMCGVSYKKIPAETNA
1RM4 Chain:A ((4-329))------------------------------------------------------------------------------------------------------------------------------------VAINGFGRIGRNFLRCW-----HGRKDSPLDVVVINDTGG--VKQASHLLKYDSILGTFDADVKT-AGDSAISVDGKVIKVVSDRNPVNLPWGDMGID--LVIEGTGVFVDRDGAGKHLQA-GAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRE-SADNELKGILSVCDE-PLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLAD----------------


General information:
TITO was launched using:
RESULT:

Template: 1RM4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1907 -9684 -5.08 -29.89
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -5.08
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.446

(partial model without unconserved sides chains):
PDB file : Tito_1RM4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1RM4-query.scw
PDB file : Tito_Scwrl_1RM4.pdb: