Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSLLNHFATELDELKQQGNFRQFT--QNVQHGRFI-------TIQNKTMLNLASNDYLGLAADINLRQEFLDSYPLERSYFSSSSSRLLTGNFDEYEQLENSLSQAFSGRAALLFNSGYHMNIGILPAVA--DSKTLILADKLVHASMIDGIRLSGAQYVRYRHNDLQHLEQLLQKYHDDDQIERIIVVTESIFSMDGDETDLTALVQLKKRFAKTMLYVDEAHSIGVRGQQGLGCAEQYNVIQEIDFLVGTLGKALAAVGGYIICDQIIKDYLINKMRPLIFSTAQPPIVMAWANFIFKKVLMA--QSQREHLKNISQYLQQAVVQKGYVS-PSTSHIIPVIVGESQATIDKAKQVQ-ESGFYAMPVRPPTVPKNSSRLRISLTSMVEQHELEALVSFL
2BWN Chain:E ((2-393))-DYNLALDKAIQKLHDEGRYRTFIDIEREK-GAFPKAQWNRPDGGKQDITVWCGNDYLGMGQHPVVLAAMHE--ALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQKEAALVFSSAYNANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHNDVAHLRELIAADD---PAAPKLIAFESVYSMDGDFGPIKEICDIAEEFG-ALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFGGYIAASARMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKALGMPIIDHGSHIVPVVIGDPVHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAM


General information:
TITO was launched using:
RESULT:

Template: 2BWN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 2117 935 0.44 2.48
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain E : 0.75

3D Compatibility (PKB) : 0.44
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.524

(partial model without unconserved sides chains):
PDB file : Tito_2BWN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2BWN-query.scw
PDB file : Tito_Scwrl_2BWN.pdb: