Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPRKGPVAKRDVLPDPIYNSKLVTRLINRVMVDGKRGIAANIIYNAFDLIKESTGNDPLEVFEQAMKNVQPVLEVKARRVGGSNYQVPVEVRPERRVTLGLRWVVNYARLRGEHTMEERLAKEIMDAANNTGASVKKREDTHKMADANRAFAHYRW
2HHH Chain:G ((2-156))-ARRRRAEVRQLQPDLVYGDVLVTAFINKIMRDGKKNLAARIFYDACKIIQEKTGQEPLKVFKQAVENVKPRMEVRSRRVGGANYQVPMEVSPRRQQSLALRWLVQAANQRPERRAAVRIAHELMDAAEGKGGAVKKKEDVERMAEANRAYAHYRW


General information:
TITO was launched using:
RESULT:

Template: 2HHH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain G - contact count / total energy / energy per contact / energy per residue : 632 -41662 -65.92 -268.79
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain G : 0.88

3D Compatibility (PKB) : -65.92
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.88
QMean score : 0.543

(partial model without unconserved sides chains):
PDB file : Tito_2HHH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2HHH-query.scw
PDB file : Tito_Scwrl_2HHH.pdb: