Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTEKGVETMKIAVDAMGGDHAPQAIVEGVALAQQDFPEVEFLLYGKEAEIKKYLTNEKNITIIHTDEKINSDDEPVKAIRRKKTASMVLAAQAVKNGEADAVFSAGNTGA-LLAAGLFIVGRIKNIER---PGLMSTL--PVVGKEGAGFDMLDLGANAENKPEHLLQYGILGSFYARKVRGIGRPRVALLNNGTEATKGSEVTKKAYELLQNETSL-NFIGNVEAR--------------ELLNGVADVVVT-DGFTGNAVLKSIEGTAMNMMNLLKSAILNEGIKGKMGAMLLKDGLRSLKAEMDYSKHGGAVLFGLKAPVIKTHGATGPDAVRYTIRQIHTMLETDVVGQLVEQFEKSEE
3UF6 Chain:A ((17-290))------SSFVFAVAGADD----EVVLETIRLALKQK-LGKFLLFGKKEDKTLTA--NESVTWIQTDT-------AEAAA-Q-------GAILAVKNKEADILVKGFIPTATLM---HHVLKKENGLRTDQLLSQIAIFDIPTY-H--KPLLITDCAMNVAPKTKEKIAITENALAVAHQ-IGITNPKIALLSAVEEVTAKMPSTLEAQEVVQHFGNQISVSGPLALDVAISKEAALHKGITDSSAGEADILIAPNIETGNALYKSLV------------YFA-------------------------GAK-VGSAVVGAKVPIVISSRNDSPENKLASFILTVRLVE----------------


General information:
TITO was launched using:
RESULT:

Template: 3UF6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1351 -56881 -42.10 -225.72
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -42.10
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.518

(partial model without unconserved sides chains):
PDB file : Tito_3UF6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3UF6-query.scw
PDB file : Tito_Scwrl_3UF6.pdb: