Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTIDWQKEVEARKEDLLEDLKNLLRVNSERDDSKVTPDAPFGPGPRDALKHMLAYGERDGFKVKNV--DNYAGHI-DLGEGDETLGIFGHMDVVPAG--DGWDTDPYEPVIKDGKIFARGSSDDKGPSMAAYYAMKIIKELDLKLSKKVRFVVGSDEESGW-GDMAYYFEH----EEEPDFGFSPDAEFP------IINGEKGNVSLALRFKGDNAGDYVLKSFVSGLRENMVPGTATAALQVPSADAAIAMEEAFYQFIEANPVSGTIEADNTYVKIELVGKGAHGASPQSGINAGSFLALFLDNYEFLGSAKQFIHVAAAYVHEDFYGEKLGVAYEDEKMGKLTMNAGLFAFEE---NGTEEANFINMNFRFPKGVTVDGLQSDIEQTVGQEGATVTRGA--RVMEPHYVPMDDPLVATLLQVYEDHTGEKGYEQIIGGGTYGRLLK----RGVAYGAMFPGYTDTMHQANEFMSLDDLFRATAIYADAIYRLAK
5UEJ Chain:B ((5-380))-----------TETQSLELAKELISRPSVTPD------------DRDCQKLLAERLHKIGFAAEELHFGDTKNIWLRRGTKAPVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAADMKTSIACFVTACERFVAKHPNHQGSIALLITSDEEGDALDGTTKVVDVLKARDELIDYCIVGEPTAVDKLGDMIKN---------------------------------------------------------------------GRRGSLSGNLTVKGKQGHIAYPHLAINPVHTFAPALLELTQE-----VWD---E---------------GNEYFPPTSFQISNINGGTGATNVIPGELNVKFNFRFSTESTEAGLKQRVHAILDKHGVQYD-LQWSCSGQPFLTQ-AGKLTDVARAAIAETCGIEAELSTTGGTSDGRFIKAIAQELIELGPSNA----TIHQINENVRLNDIPKLSAVYEGILARLLA


General information:
TITO was launched using:
RESULT:

Template: 5UEJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1884 62336 33.09 177.59
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain B : 0.65

3D Compatibility (PKB) : 33.09
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.468

(partial model without unconserved sides chains):
PDB file : Tito_5UEJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5UEJ-query.scw
PDB file : Tito_Scwrl_5UEJ.pdb: