Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMLKEITFSVFFLQFIEKSLYFASYSFFVTIRNGTSKKMKKQGTRYMEKKQKIILGATSALTIVILILSLFFVIRSSTKKEPIIPEKKITEKAKEPTDDKQQLVTQAKNLAQSYDYDQAIALLEKDSKNGSTETQQLLQTLKKEKEQLIDWSDPTQISHVFFHSLIVDPQKAFHSQQAQGYKDYMVTVEEFNRSIEQLYQNDFVLVNLNDLIQKDEQGNLSFNGLALPEGKKPLVLSQDDVSYYEYMDNSGFPSRLVVSNNNEIKNVYKEKDKEEIGDFDMVPLIDAFVKKHPDFSYRGAKGTLALTGYNGVLGYRTSKSQYGDNEKTKKEIKEAKKVAEQLKKDGWSFASHTWGHLNMTQA-SLEDVKKDNELWQQEVAPILGK-TNILIYPFGADISDWQPYSAENQK----------FAYLKSQGFDI-FCNVDASTPAWGQLGTDFYRNARINIDGIRFQSDLDGKNPILDPFINVHDVYDKEARESA
5JMU Chain:A ((17-154))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PGNKIIYLTFDD----------GPGKYTQG----------------------LLDVLDKY----------NVKATFFVTNTHPD----------------------YQNMIAEEAKRGHTVAIHSASHKYNQIYTSEQAFFDDLEQMNSIIKAQTGNDASIIRFPGGS-------SN--TVSKDYPGIMTQLVNDVTARGLLYCDWNVSS------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5JMU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 496 -13525 -27.27 -109.07
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -27.27
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.375

(partial model without unconserved sides chains):
PDB file : Tito_5JMU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5JMU-query.scw
PDB file : Tito_Scwrl_5JMU.pdb: