Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAELINGKELAEKMQAEIAEKIQKLKD--NGIHPGLVVLLVGENPASQIYVRNKERVAKEIGIHSLVERYPETISEDELLAEIEKYNQDPSFHGILVQLPLPK--HIDEEKILLAIRPEKDVDGFHPMNLGRLLAGK--PDKIPCTPYGIMKMFEAYSIDPAGKRAVVIGRSNIVGKPMAQLLLMADATVTVAHSKTENLAELAQEADILVVAIGRGHFVTKEFVKPGAVVIDVGMNRDANGKLIGDVKFDEVEPIAGWITPVPKGVGPMTITMLMYQTVKSAEAFGAGE
1A4I Chain:A ((3-295))PAEILNGKEISAQIRARLKNQVTQLKEQVPGFTPRLAILQVGNRDDSNLYINVKLKAAEEIGIKATHIKLPRTTTESEVMKYITSLNEDSTVHGFLVQLPLDSENSINTEEVINAIAPEKDVDGLTSINAGRLARGDLNDCFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDEEVNKGDILVVATGQPEMVKGEWIKPGAIVIDCGINY----KVVGDVAYDEAKERASFITPVPGGVGPMTVAMLMQSTVESAKRFL---


General information:
TITO was launched using:
RESULT:

Template: 1A4I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1578 3211 2.03 11.59
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.85

3D Compatibility (PKB) : 2.03
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.85
QMean score : 0.635

(partial model without unconserved sides chains):
PDB file : Tito_1A4I.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1A4I-query.scw
PDB file : Tito_Scwrl_1A4I.pdb: