Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSAPATAATPPIASGSGNGTISGNQEVNPRARDPHSSQSHHAEHAGGSPRRSKSCVSMHASTAGGTAHRQVIGNYELGRVLATGDFDCRTRLCRHITTGVRYVVRVYDKRVLAE--AQWMWNRVAESIRVQRTLPKNKYVLEMVECFESNTSVYMLMHLFPSI-NITKLFTDSAARAKLLSCLQAMSRANAHTSAAATSNGSLTTEPEKTAKGEPHRKPSHVHALPATDPTSAPKSVLSRGLKTSMRTPSASAAESQPSEHGTEETADANEFSHRGGGKQESTPSTAASTMGGASTSPMAVASVNAFLGTAVPSHVPLSLIRDLFEQAVKGVSHLHQYNVAHTGIAPDHLLVGANGLLRISNMVSCCFCAQGERLHELRGTRHTVAPEVLRGESYDPYLADAWALGVVLYFMLNRGRYPHDGASTLRHILHGRVRPSRPGLPPVALDLVSRLLQGSPEERLPVDAILTHPFFLAPLPTIAEEAAAEAAELQAQHVRHRLTTGAAVHGGHSVVSDRDDLNGRRLRSKEKAVGAGRQEASSPHWESLVTFGSGDSITGRDEVDSSGLNPQHNGDDDASAAEDGSRRSCRDTVCPPRAGLPTHQPSAASRSPSASMKRAHLAASSLARTSPCQSVAGSVSASTRPVWCPHLAPTLDALEDLAGRVIQYHYRQMKRRQQYRAETRTLVARSQSMRRAKVEEEGIGGQQQPLLSLVPAVVVLSRPPSLDLVPSSAGTVTPKRDEVLHRQRQRQQQPSDLYLKRKPVMAANVLDAAAGSQSPSSARRRASTNNSVDTGGPLEDEPLSHWHKSGTASPASTIQSVLVTGANSVVIGTRAGSPGSLDRDDDGTESSLISSLDGALRANVAEGTNAVASLDTTPQESLKLPVPLPLNQRRPGSSVRACNTPANSVFIAPPPLRPSSNSSVLPTLASLHGLGSSVGRFADRARVGEGMMVKDDERCPLCHREPYMTRAIGVRPYGGTSYVYADGRFTKVSSV
3DLS Chain:B ((21-282))---------------------------------------------------------------------EYSQKYSTMSPLGSGAFG-FVWTAVDKEKNKEVVVKFIKKE----WIEDPKLGKVTLEIAILSRV-EHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDR--------------------------------------------------------------------------------------------------------------------------------------------HPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVF-EENPFCELEETVE---AAI-HPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPV------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3DLS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1248 -33019 -26.46 -130.51
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain B : 0.60

3D Compatibility (PKB) : -26.46
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.399

(partial model without unconserved sides chains):
PDB file : Tito_3DLS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DLS-query.scw
PDB file : Tito_Scwrl_3DLS.pdb: