Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----MAKCKKYEEFGLDSLLQETRGGRNHAYMT------VEQEKVFLARHLKATEAGEF-------------VTID-ALFQAYKKEL---GRSYTR-------DAFYQLLK-RHGWRNITPRPEHPRKA----DAQTIVAS--------KNKVSIQE-D-K
4QT6 Chain:A ((1-157))GFDPEKAQCCLVEN---GQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGVSRWPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGKNGEEPKLAFEDVDAAELYPCVMFYSSNPGEKVKICDMQMR


General information:
TITO was launched using:
RESULT:

Template: 4QT6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 437 33546 76.76 310.61
target 2D structure prediction score : 0.36
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : 76.76
2D Compatibility (Sec. Struct. Predict.) : 0.36
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.085

(partial model without unconserved sides chains):
PDB file : Tito_4QT6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4QT6-query.scw
PDB file : Tito_Scwrl_4QT6.pdb: