Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNIAQALAIRGEPDSYERQENAWLLEHFLKINSLELKFRLEQELTAQQEQDYLAGLERIQNGEPLAYVTGSQPFWTLDLKVTSDTLVPRPDTEVLVETVLNLNLPKNANIVDLGTGTGAIALALASERPDWFVTATDIYAPTLEVAKENAQTHGLHHVKFACGVWYEALEPQQFDLIVSNPPYIDPEDEHMQALATEPRRALVADHHGLADIEIIIAQGKNWLKPQGWIALEHGYDQGQAVRGIFAEHGFSEIRTIQDYGRNDRVTLASLLIK
3CJQ Chain:A ((105-215))------------------------------------------------------------------------------------------ETTRLALKALARHLRPGDKVLDLGTGSGV--LAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRP-RFLEGSLEAALPFGPFDLLVAN-----LYAELHAALAPRYREALVPGGRAL----------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3CJQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 536 -44699 -83.39 -402.69
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -83.39
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.554

(partial model without unconserved sides chains):
PDB file : Tito_3CJQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3CJQ-query.scw
PDB file : Tito_Scwrl_3CJQ.pdb: