Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRHYTGIDQLINSFDQALRSLVPGATAAQRQNPAETVEAKLGVEDARHVAGLMRVNHSGEVCAQALYHGQALTAKL---PNVRREMQQAAIEEQDHLAWCEDRLKELNSHTSLLNPIWYGLSYGMGALAGIAGDKYSLGFVAETERQVSLHLQDHLNQLPAQDERSRKILEQMNEDELHHRHTALEAGGVELPYAVKITMTAISKLMTKTSYYL
3AK8 Chain:B ((19-162))--------------------------------------NDVSESDKKATVELLNRQVIQFIDLSLITKQAHWNMRGANFIAVHEMLDGFRTALTDHLDTMAERAVQLGGVALGTTQVINSKTPLKSYPLDIHNVQDHLKELADRYAVVANDVRKAIGEAK--DEDTADIFTAASRDLDKFLWFI------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3AK8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 587 -3077 -5.24 -21.82
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain B : 0.57

3D Compatibility (PKB) : -5.24
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.434

(partial model without unconserved sides chains):
PDB file : Tito_3AK8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3AK8-query.scw
PDB file : Tito_Scwrl_3AK8.pdb: