Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MQYQMITREQCLYWDQEDELKKFKDEFALPEGVIYLDGNSLGARPKKSLAVAQHIISQEWG-EDLINSW-NKADWWGLPTRLGDKVAKLVGAEQGEVVISDSTTLNLFKVLSAAVKIQADKFPEHKIIVAEKDAFPTDIYIIEGFIDLIQKGYQVELID-------GVEDLSRALEKDVAVVVLSHVNYRTGYFYDMASINEQIHSKDALVIWDLCHSVGAVPMHLNQTDSDFAIGCTYKYLNGGPGSPALLWVNEKHRDQFWQPLSGWWSHKKPFDMAQHYEPANSIRRYLCGTQPVISMSLIECGVDIFLHADMQKIREKSLKLTDLFIQLVHQECSEFGFELITPLDHKHRGSHVSYRHEF--GYEIIQALIARGVIGDYRE-----------PAVLRFGITPLYLGFEDIWNAVQHLKATMLNSEWKNKEYLVRGEVT 5B89 Chain:B ((18-417)) -------------MASMRIPEDVRKDIPLTNEVIYFDNTATSLTPKPVVEAMD-EYYLKYRANVHRGVHRLSQMATHKYEESRKIVADFIGAKFEEIVFTKNTSESLNLVALGLGHI----FKRGDKIVTTPYEHHSDLLPWQRLATKLGL--KLEFIEGDDEGNLDLSDAEKKIK-GAKLVAVQHVSNALGVIHEVEELGKIAKDEGAIFVVDAAQSAGHMEVNVKKLHADFLAFSGHKGPMGPTGI-GVLYIREEFFDTFEPPLIGGGTIE-DVSLD-GYKLTEPPERFEAGTPNIGGAIGLAAGIRYIERIGLGRIERQEHKLVKRTTEGLDEL----EVPWYGPRNLKKHAGVVSFNVPGLHPHDVAAILDDHSIMVRSGHHALPVMKKLGINGTVRASFHV-YNSLEEVETFLGVMEELVKGL--------------

General information: TITO was launched using: RESULT: Template: 5B89.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 2164 34232 15.82 90.80 target 2D structure prediction score : 0.63 Monomeric hydrophicity matching model chain B : 0.69 3D Compatibility (PKB) : 15.82 2D Compatibility (Sec. Struct. Predict.) : 0.63 1D Compatibility (Hydrophobicity) : 0.69 QMean score : 0.482

(partial model without unconserved sides chains): PDB file : Tito_5B89.pdb: (Unconserved sides chains are recalculated) : Sequence: align-5B89-query.scw PDB file : Tito_Scwrl_5B89.pdb: