Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSKVKTVYRCEQCGADHLKWAGQCSECGEWNCLNEVKLEPTTAHRARPKVGGYAGQVANITTLNKVSVSHETRLPTGISEFDRVLGGGLVTGSVVLIGGDPGIGKSTILLQTATHMASAKSSALYITGEESLSQVALRAQRLDLPTDQLKVMAETCVERICEVLEQERPVVAILDSIQTLYTETLQSAPGGVSQIRESAALLTRYAKNSGTALFIVGHVTKEGALAGPRVLEHMVDCVLYFEGQSDSRYRMIRAVKNRFGAVNELGVFGMTDKGLREVANPSAIFLSRYDEAIPGSIVMISREGTRPLLVEVQALVDDAQGQPRRVALGLEQN----RLNMLLAVMH---RHGGVQ--T-TGQDVYVNIV-GGLKITETGSDLAVLLACASSLRTKALPQQLAVFGEVGLSGEIRPVPNGQERLKEAAKHGFKYVILPRGNAPQ--K----AIPGVQVIAVARLHEALTEAMQLSDELT
3WU4 Chain:E ((9-192))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NRVGQVTGLAWTEVGGDLLTIETACVPGK--GKLTYTGSLGEVMQESIQAALTVVRARAEKLGINPDFYEKRDIHVHVPEGATPKDGPAAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQNEPS--


General information:
TITO was launched using:
RESULT:

Template: 3WU4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 886 -31780 -35.87 -190.30
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain E : 0.59

3D Compatibility (PKB) : -35.87
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.486

(partial model without unconserved sides chains):
PDB file : Tito_3WU4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3WU4-query.scw
PDB file : Tito_Scwrl_3WU4.pdb: