Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSSIFDLHIQVQPQHIDALGHVNNVMYVQWMQDVAAAHVETLGVGVTKYLELKHAMV---AVEHHVQYRKAAFEGEEIVLRTWLDDINALYSFRQYAFFRPS---DQAILFVGNTKWACIEIASGRPKRMSPTFTQAYKPLDSSINPLDFTVSYA
1BVQ Chain:A ((2-140))-ARSITMQQRIEFGDCDPAGIVWYPNYHRWLDAASRNYFIKCGLPPWRQTVVERGIVGTPIVSCNASFVCTASYDDVLTIETCIKEWRRKSFVQRHSVSRTTPGGDVQLVMRADEIRVFAMNDGERLRAI---------EVPADYIELC------


General information:
TITO was launched using:
RESULT:

Template: 1BVQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 583 -25499 -43.74 -191.72
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -43.74
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.361

(partial model without unconserved sides chains):
PDB file : Tito_1BVQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1BVQ-query.scw
PDB file : Tito_Scwrl_1BVQ.pdb: