Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMRDAAATERERLPTPADGDVDSLYEDGTEAETAKQRSTVSTTTLFLALPWLGCTLFLVAVLLYVNVHTFSIWSRLVSMPGGVVADVSVQHRDMARYTVLFVSLALLAVHLAISFCLFRRAYHVLWDVQMSLVELSFMVDVIRTHQHSTFFFVDCVERAQRVRESMRYWVKEFSGFKEICAAEMAVNQVTLRLMTRPRESAQRLESPGDTQLPCTGSGTSSPVQLARGGRLPPDTTAAAFRLPQDAAWSPHVQSVRTDSAHADPGPGRQLAGHHSGSRRSLSFTTEIGIAQVPFEVTLKRRHVALLLLSFLTYRELVRAEAEEARQISRDFIAAVNMCAQRYKGCIVELYSDRAILSWNAFFESAGNYAQTCAQCGECFHDRFVRRFSPESGAYFSTAGYTGHIVCGTTTEKSLLLHGQHVSMLRGLPTLLEMRYCAYVWLGTPPPACTSSPLSWTRIGAVQAGADFSVDLHAMRRTSAEPLPAAMVWHMPQWTTFGDERAVRAEVLTNDGAARLQQDGDTAPVTPASTAASAAATGVATAFPSSPFLSSPLCLRGVGTPYETFYDRSHNRYQLSNTVLGESKSCVVRLAIS-ETGNFVAVKEIKIERGDVKPIRRRRYQRENRIIVTRGEKPQWMNEVEIMERHRHTCIVAYISFVEAEDKLRIVMEYVGGGNLLKFASSSRGAEGEGPPMAVLLRNVVEGLKFLHQKGIVHGDIKPQNVLVPDSGPCKIADFGISRRATTA--VTSAIEGTPFYMSPEATR----GEVTAACDIWSFGIMMAQVLTGRLPYDASVRDYYLVSQFMCNKDVKRE--LHTPLKKPALDVFLACTEYDPGKRKTAKDLLKMPYFTAHAASSTEDA
5J5T Chain:A ((3-269))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QEDFELIQR-IGSGTYGDVYKARNVNTGELAAIKVIKLEPG--------------------EDFAVVQQEIIMMKDCKHPNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTG-PLS-ELQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIA---AFIGTPYWMAPEVAAVERKGGYNQLCDLWAVGITAIELAELQPPMFDLHPMRALFLMTK-SNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPFVTQHL-------


General information:
TITO was launched using:
RESULT:

Template: 5J5T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1124 -37226 -33.12 -147.14
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.56

3D Compatibility (PKB) : -33.12
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.496

(partial model without unconserved sides chains):
PDB file : Tito_5J5T.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5J5T-query.scw
PDB file : Tito_Scwrl_5J5T.pdb: