Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSTAGRYKHVVKLGEGTYGSVYKGTEIQTGKVVAFKRMVVTSDDEGVPGAAIREICLLKELRHDNVVDLFEVLFEPPKITMIFELCDCDLKRFMESRPKRLLDAEAEMRPILKQIFIGLEYLHSRSVVHRDMKPQNIFVNVRAPDFAALTASPSSRQDHLQPPPFSGVPTAVGGDVQSAAGSDGRPNPFAGADSVPPWEAAAAAPSNTPNQLIVKIGDFGLARVEEIPVKKYSHEVVTLWYRSPDVLMGSALYSYPVDIWSMGAIFFEMATSKVLFSGRHEDEQLLRMFWLLGSPTRETWPSMLSYPGAMERLERASRAAAERPDLRFGSEVYVQQQQQPPSSQSHSGGRAPDLLTQIAHKRFYHSLKAIQQREESARSSSNTYQLPVELWFDRPLFGEYMSATGFDSCVTAEGVNLLRQCLLYEPNHRITAAAAVRHAYLHAVSVPTAGALDVLMTSLLQTMEACHLL
3GC0 Chain:A ((33-243))---IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEH-------TAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNP---DVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSV--------------------------------------------------------------------ETPVLKIGDFGLARAF---------EIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3GC0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 895 -121211 -135.43 -634.61
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -135.43
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.435

(partial model without unconserved sides chains):
PDB file : Tito_3GC0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GC0-query.scw
PDB file : Tito_Scwrl_3GC0.pdb: