Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceDVEPPGASVK-PTEAARRRVFKIDGEEFT-PLE---TDCLIRI-----FKNKKTVHALFVPPGTELDWRLDHNHYAVGIKHNCDIIIGWKPSSWRIEGDKVSSLADGFSVVTTKSTD
1L9N Chain:A ((594-692))----PTLTLEVLNEARVRKPVNVQ-MLFSNPLDEPVRDCVLMVEGSGLLLGNLKIDVPTLGPKERSRVRFDILPSRSGTK----QLL------ADFSCNKFPAIKAMLSIDVAE---


General information:
TITO was launched using:
RESULT:

Template: 1L9N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 390 1057 2.71 11.88
target 2D structure prediction score : 0.45
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : 2.71
2D Compatibility (Sec. Struct. Predict.) : 0.45
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.293

(partial model without unconserved sides chains):
PDB file : Tito_1L9N.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1L9N-query.scw
PDB file : Tito_Scwrl_1L9N.pdb: