Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----KCVIKRVFSDGSSVKIPAQPAQSTTISKQAVWVYGNCQPFPVVLNDGSKLS--------GEIETPA--VTPVES-
3JB9 Chain:H ((9-84))MIPPINFIFKLLQQHTPVSIWLFEQTDIRLQG---QIRGFDEFMNIVLDDAVQVDAKNNKRELGRILLKGDNITLIQAI


General information:
TITO was launched using:
RESULT:

Template: 3JB9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain H - contact count / total energy / energy per contact / energy per residue : 152 3008 19.79 49.31
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain H : 0.68

3D Compatibility (PKB) : 19.79
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.244

(partial model without unconserved sides chains):
PDB file : Tito_3JB9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3JB9-query.scw
PDB file : Tito_Scwrl_3JB9.pdb: