Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceFVNTTESCEVERLFKATSPRGEPQDGLYCIRNSSTKSGK-VLVVWDETSNKVRNYRIFEKD------------------SKFYLEGEVLFVSVGSMVEHY
2DVJ Chain:A ((18-104))----LSRQEAVALLQ------GQRHGVFLVRDSSTSPGDYVLSVSEN--SRVSHYIINSSGPRPPVPPSPAQPPPGVSPSRLRI-GDQEFDSLPALLEFY


General information:
TITO was launched using:
RESULT:

Template: 2DVJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 190 -8040 -42.31 -118.23
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -42.31
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.306

(partial model without unconserved sides chains):
PDB file : Tito_2DVJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2DVJ-query.scw
PDB file : Tito_Scwrl_2DVJ.pdb: