Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIVEKEEKGEEMKPVISIIMGSKSDWATMQKTAEVLDRFGVAYEKKVVSAHRTPDLMFKHAEEARSRGIKIIIAGAGGAAHLPGMVAAKTTLPVIGVPVKSRALSGVDSLYSIVQMPGGVPVATMAIGEAGATNAALFALRLLSVEDKSIADALANFAEEQGKIAEESSNELI
5CLJ Chain:B ((23-143))-------------PVVGIIMGSQSDWETMRHADALLTELEIPHETLIVSANRTPDRLADYARTAAERGLNVIIAGAGGAAHLPGMCAAWTRLPVLGVPVESRALKGMDSLLSIVQMPGGVPVGTLAIGASGAKN---------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5CLJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 668 -85258 -127.63 -704.61
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain B : 0.79

3D Compatibility (PKB) : -127.63
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.538

(partial model without unconserved sides chains):
PDB file : Tito_5CLJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5CLJ-query.scw
PDB file : Tito_Scwrl_5CLJ.pdb: