Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIFIEYKIITLFISLKIKKGVFIMKNWKKYAFASASVVALAAGLAACGNLTGNSKKAADSGDKPVIKMYQIGDKPDNLDELLANANKIIEEKVGAKLDIQYLG-WGDYGKKMSVITSSGENYDIAFADN---Y-IVNAQKGAYADLTELYKKEGKDLYKALD---PAYIKGNT-VNGKIYAVPVAANVASSQNFAFNGTLLAKYGIDISGVTSYETLEPVLKQIKEKAPD------VVPFAIGKVFIPSDNFDYP--VANGLPFVIDLEGDTTKVVNRYEVPRFKEHLKTLHKFYEAGYIPKDVATSDT--SFDLQQDTWFVREETVGPADYGNS--LLSRVANKDIQIKPITNFI-KK------NQTTQVANFVISNNSKNKEKSMEILNLLNTNPELLNGLVYGPEGKNWEKIEGKENRVRVLDGYKGNTHM-GGWNTG-------NNWILYINE-NVT-DQQIENSKKELA-EAKESPALGFIFNT---DNVKSEISAIANTMQQFDTAINTGTVDPDKAIPELMEKLKSEGAYEKVLNEMQKQYDEFLKNKK
1J1N Chain:B ((8-491))------------------------------------------------------------DKPLTLKIHMHFRDKWVWDENWPVAKESFRL-TNVKLQSVANKAATNSQEQFNLMMASGDLPDVVGGDNLKDKFIQYGQEGAFVPLNKLIDQYAPHI-KAFFKSHPEVERAIKAPDGNIYFIPYVPDGVVARGYFIREDWLKKLNLKP--PQNIDELYTVLKAFKEKDPNGNGKADEVPFIDRHPDEVFRLVNFWGARSSGSDNYMDFYIDNGRVKHPWAETAFRDGMKHVAQWYKEGLIDKEIFTRKAKAREQMFGGNLGGFTHDWFASTMTFNEGLAKTVPGFKLIPIAPPTNSKGQRWEEDSRQKVRPDGWAITVKNKNPVETIKFFDFYFSR-PGRDISNFGVPGVTYDIKNGKAV-F--KDSVLKSPQPVNNQLYDMGAQIPIGFWQDYDYERQWTTPEAQAGIDMYVKGKYVMPGFEGVNMTREERAIYDKYWADVRTYMYEMGQAWVMGTKDVDKTWDEYQRQLKLRG-LYQVLQMMQQAYDRQYK---


General information:
TITO was launched using:
RESULT:

Template: 1J1N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 2378 117771 49.53 266.45
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain B : 0.65

3D Compatibility (PKB) : 49.53
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.367

(partial model without unconserved sides chains):
PDB file : Tito_1J1N.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1J1N-query.scw
PDB file : Tito_Scwrl_1J1N.pdb: