Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMKVFLQNRDFRQLTINQWISTLGDTIFYLAFLNYVADASFAPLAILLITISETLPQVLQIFLGVLADFQHHRVLKYTVISFAKFLL-YSIVS--LSLSGQSFSLLLVAFICLINLLSDTL-------SYFSGAMLTPIFIRIIGQDHLAEAIGFKQSTVSLVKTISNILGGVLLGILSIQFISLLNALT----------FLI--------------AFLGILF-IKTDLLKVEK-----------TINYQEGLSVKSFCQHLLQSSK-------LIWN----------MNKVLLVLFIISTSQAVINV--TVPVSTLFLRNQPFLNLQTGQSLALLSTFELSALIVGSLVSGYLQHTISIKTA----LYASLVIQLLLLVGFATVRFDWIL------IFSTLDAFFAGVLSPRLQELV----FKQIPEESMGAVQSSISAITVVLPSLFTISLVTIATSFGTLAVSFVLLL---FLLVAFVMLLNIRESI--
5I6C Chain:A ((66-545))-----------PFFGLNEKIPVLLAFILGLQHALAMLAGVVTPPLIISSSLS--LPSDLQQYLVSTSLIVCGLLSMVQITRFHIYKTPYYIGSGVLSVMGVSFSIISVASGAFNQMYSNGFCQLDEAGNRLPCPEAYGALIGTSACCALVEILLAFVPPKVIQKIFPPIVTGPTVMLIGISLIGTGFKDWAGGSACMDDGMLCPSATAPRPLPWGSPEFIGLGFLVFVSIILCERFGAPIMKSCSVVIGLLVGCIVAAACGYFSHADIDAAPAASFIWVKTFPLSVYGPMVLPIIAVFIICACECIGDVTATCDVSRLEVRGGTFESRIQGAVLADGINSVVAALATMTPMTTFAQNNVVIALTRCANRWAGYCCCLILIVAGIFAKFAAAIVAIPNSVMGGMKTFLFASVVISGQAIVAKAPFTRRNRFILTASMALGYGATLVPTWFGNVFPQTENRDLEGFENAIELVLETGFAVTAFVAMLLNAIMPAE


General information:
TITO was launched using:
RESULT:

Template: 5I6C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2199 -317692 -144.47 -802.25
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -144.47
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.259

(partial model without unconserved sides chains):
PDB file : Tito_5I6C.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5I6C-query.scw
PDB file : Tito_Scwrl_5I6C.pdb: