Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAFAKISQVAHYVPEQVVTNHDLAQIMDTNDEWISSRTGIRQRHISRTESTSDLATEVAKKLMAKAGITGEELDFIILATITPDSMMPSTAARVQANIGANKAFAFDLTAACSGFVFALSTAEKFIASGRFQKGLVIGSETLSKAVDWSDRSTAVLFGDGAGGVLLEASEQEHFLAES-LNSDGSRSECLTYGHSGLHSPFSDQESADSFLKMDGRTVFDFAIRDVAKSIKQTIDESPIEVTDLDYLLLHQANDRILDKMARKIGVDRAKLPANMMEYGNTSAASIPILLSECVEQGLI-PLDGSQTVLLSGFGGGLTWGTLILTI
4X0O Chain:B ((4-318))-CYAEITGWGKCLPPATLSNHDLSTFLDTSDEWIQSRTGIEQRRISHV-NTSDLATVAAQHAIACAGVSVEEIDLIIVATCSPDSLIPNIASRVQQNLGIPSAAAFDLNAA-TGFLYGLETATRLMQASHYRHALVIGAERLSFYLDWTKRDTAVLFGDGAGAVVLSKTEQKVGLQDAQIGCDAQGRDILAVPKFGTAMDRFDADNGYWAFDFVGKEIFKRAVRGMGAAAQQVLARSGLSTEEIDVVIPHQANIRIIQTLCDLAGIAQDKAFVNIHRYGNTSAATVPIALCEALEQGKIKPHD---DLLVAAFGAGLTWG------


General information:
TITO was launched using:
RESULT:

Template: 4X0O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1897 -142455 -75.09 -456.58
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain B : 0.84

3D Compatibility (PKB) : -75.09
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.500

(partial model without unconserved sides chains):
PDB file : Tito_4X0O.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4X0O-query.scw
PDB file : Tito_Scwrl_4X0O.pdb: