Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAEIYLAGGCFWGLEEYFSRISGVLETSVGYANGQVETTNYQLLKETDHAETVQVIYDEKEVSLREILLYYFRVIDPLSINQQGNDRGRQYRTGIYYQDEADLPAIYTVVQEQERMLGRKIAVEVEQLRHYILAEDYHQDYLRKNPSGYCHIDVTDADKPLIDAANYEKPSQEVLKASLSEESYRVTQEAATEAPFTNAYDQTFEEGIYVDITTGEPLFFAKDKFASGCGWPSFSRPISKELIHYYKDLSHGMERIEVRSRSGSAHLGHVFTDGPRELGGLRYCINSASLRFVAKDEMEKAGYGYLLPYLNK
4W8C Chain:B ((12-142))-----FALGCFWGPDAQFGSIKGVVSTRVGYAGGTTNNPSYYNLG--DHSESIEIQYDANVITYGELLNIFWNLHNPVY-----ETTNRQYMSRIFYLDDGQKSEALEMKRQIEAANGEKIYTEIVPLENFYLAEGYHQKYYL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4W8C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 459 -38118 -83.05 -290.98
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain B : 0.63

3D Compatibility (PKB) : -83.05
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.509

(partial model without unconserved sides chains):
PDB file : Tito_4W8C.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4W8C-query.scw
PDB file : Tito_Scwrl_4W8C.pdb: